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Table 2 Association analysis of SNP rs547984 with allele frequency and genotype distribution in POAG patients and controls

From: Polymorphism rs547984 on human chromosome 1q43 is not associated with primary open angle glaucoma in a Saudi cohort

SNP (Nearest gene)

rs547984 (ZP4)

Allelic analysis

Controls (n = 95) No. (%)

POAG (n = 90) No. (%)

Odds ratio

95% confidence interval

p valuea

C

95 (50.0)

92 (51.1)

1

Reference

-

Ab

95 (50.0)

88 (48.9)

1.08

0.72 – 1.62

0.708

HWE P

0.60

0.13

-

-

-

Genotype and Model analysis

C/C

25 (26.3)

20 (22.2)

1

Reference

-

C/A

45 (47.3)

52 (57.7)

0.69

0.34 – 1.41

0.310

A/A

25 (26.3)

18 (20.0)

1.11

0.47 – 2.58

0.806

Additive (Trend)

-

-

-

-

0.356c

Dominant

-

-

1.25

0.63 – 2.45

0.517

Recessive

-

-

0.70

0.35 – 1.39

0.309

  1. aChi2 test, bRisk variant, HWE P – Hardy-Weinberg equilibrium p value, cFisher exact test